The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005

Rachel Allen; Cecilia Rad Menendez; David Green; Christine Campbell; Frederik De Boever; Joanne Field; Karen MacKechnie; Michael Ross; Rachel Saxon; Naomi Thomas; Culture Collection of Algae and Protozoa collective; University of Oxford and Wytham Woods Genome Acquisition Lab; Earlham Institute Genome Acquisition Lab and Protists Project; Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team; Wellcome Sanger Institute Scientific Operations; Wellcome Sanger Institute Tree of Life Core Informatics team; Tree of Life Core informatics collective; Darwin Tree of Life consortium

doi:10.12688/wellcomeopenres.22472.1

The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005

Rachel Allen
, Cecilia Rad Menendez
, David Green
, Christine Campbell
, Frederik De Boever
, Joanne Field
, Karen MacKechnie
, Michael Ross
, Rachel Saxon
, Naomi Thomas
, Culture Collection of Algae and Protozoa collective
, University of Oxford and Wytham Woods Genome Acquisition Lab
, Earlham Institute Genome Acquisition Lab and Protists Project
, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team
, Wellcome Sanger Institute Scientific Operations
, Wellcome Sanger Institute Tree of Life Core Informatics team
, Tree of Life Core informatics collective
, Darwin Tree of Life consortium

SAMS UHI

Research output: Contribution to journal › Article › peer-review

Abstract

We present a genome assembly from a colony of Pseudopediastrum boryanum (CCAP 291/2) (Chlorophyta; Chlorophyceae; Spaeropleales; Hydrodictyaceae). The genome sequence is 183.3 megabases in span. Most of the assembly is scaffolded into 20 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 44.62 kilobases and 205.69 kilobases in length, respectively.

Original language	English
Article number	338
Journal	Wellcome Open Research
Volume	9
Issue number	338
DOIs	https://doi.org/10.12688/wellcomeopenres.22472.1
Publication status	Published - 24 Jun 2024

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Allen, R., Rad Menendez, C., Green, D., Campbell, C., De Boever, F., Field, J., MacKechnie, K., Ross, M., Saxon, R., Thomas, N., Culture Collection of Algae and Protozoa collective, University of Oxford and Wytham Woods Genome Acquisition Lab, Earlham Institute Genome Acquisition Lab and Protists Project, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations , Wellcome Sanger Institute Tree of Life Core Informatics team, Tree of Life Core informatics collective, & Darwin Tree of Life consortium (2024). The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005. Wellcome Open Research, 9(338), Article 338. https://doi.org/10.12688/wellcomeopenres.22472.1

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title = "The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005",

abstract = "We present a genome assembly from a colony of Pseudopediastrum boryanum (CCAP 291/2) (Chlorophyta; Chlorophyceae; Spaeropleales; Hydrodictyaceae). The genome sequence is 183.3 megabases in span. Most of the assembly is scaffolded into 20 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 44.62 kilobases and 205.69 kilobases in length, respectively.",

author = "Rachel Allen and \{Rad Menendez\}, Cecilia and David Green and Christine Campbell and \{De Boever\}, Frederik and Joanne Field and Karen MacKechnie and Michael Ross and Rachel Saxon and Naomi Thomas and \{Culture Collection of Algae and Protozoa collective\} and \{University of Oxford and Wytham Woods Genome Acquisition Lab\} and \{Earlham Institute Genome Acquisition Lab and Protists Project\} and \{Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team\} and \{Wellcome Sanger Institute Scientific Operations\} and \{Wellcome Sanger Institute Tree of Life Core Informatics team\} and \{Tree of Life Core informatics collective\} and \{Darwin Tree of Life consortium\}",

note = "Copyright: {\textcopyright} 2024 Allen R et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.",

year = "2024",

month = jun,

day = "24",

doi = "10.12688/wellcomeopenres.22472.1",

language = "English",

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Allen, R, Rad Menendez, C, Green, D, Campbell, C, De Boever, F , Field, J, MacKechnie, K, Ross, M, Saxon, R, Thomas, N, Culture Collection of Algae and Protozoa collective, University of Oxford and Wytham Woods Genome Acquisition Lab, Earlham Institute Genome Acquisition Lab and Protists Project, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations , Wellcome Sanger Institute Tree of Life Core Informatics team, Tree of Life Core informatics collective & Darwin Tree of Life consortium 2024, 'The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005', Wellcome Open Research, vol. 9, no. 338, 338. https://doi.org/10.12688/wellcomeopenres.22472.1

TY - JOUR

T1 - The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005

AU - Allen, Rachel

AU - Rad Menendez, Cecilia

AU - Green, David

AU - Campbell, Christine

AU - De Boever, Frederik

AU - Field, Joanne

AU - MacKechnie, Karen

AU - Ross, Michael

AU - Saxon, Rachel

AU - Thomas, Naomi

AU - Culture Collection of Algae and Protozoa collective,

AU - University of Oxford and Wytham Woods Genome Acquisition Lab,

AU - Earlham Institute Genome Acquisition Lab and Protists Project,

AU - Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team,

AU - Wellcome Sanger Institute Scientific Operations ,

AU - Wellcome Sanger Institute Tree of Life Core Informatics team,

AU - Tree of Life Core informatics collective,

AU - Darwin Tree of Life consortium,

N1 - Copyright: © 2024 Allen R et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

PY - 2024/6/24

Y1 - 2024/6/24

N2 - We present a genome assembly from a colony of Pseudopediastrum boryanum (CCAP 291/2) (Chlorophyta; Chlorophyceae; Spaeropleales; Hydrodictyaceae). The genome sequence is 183.3 megabases in span. Most of the assembly is scaffolded into 20 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 44.62 kilobases and 205.69 kilobases in length, respectively.

AB - We present a genome assembly from a colony of Pseudopediastrum boryanum (CCAP 291/2) (Chlorophyta; Chlorophyceae; Spaeropleales; Hydrodictyaceae). The genome sequence is 183.3 megabases in span. Most of the assembly is scaffolded into 20 chromosomal pseudomolecules. The mitochondrial and plastid genome assemblies have lengths of 44.62 kilobases and 205.69 kilobases in length, respectively.

U2 - 10.12688/wellcomeopenres.22472.1

DO - 10.12688/wellcomeopenres.22472.1

M3 - Article

SN - 2398-502X

VL - 9

JO - Wellcome Open Research

JF - Wellcome Open Research

IS - 338

M1 - 338

ER -

The genome sequence of the chlorophyte Pseudopediastrum boryanum CCAP 291/2 (Turpin) E. Hegewald 2005

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