Standard reporting requirements for biological samples in metabolomics experiments: Environmental context

Norman Morrison, Dan Bearden, Jacob G. Bundy, Tim Collette, Felicity Currie, Matthew P. Davey, Nathan S. Haigh, David Hancock, Oliver A.H. Jones, Simone Rochfort, Susanna Assunta Sansone, Dalibor Štys, Quincy Teng, Dawn Field, M. R.Mark R. Viant

Research output: Contribution to journalArticle

58 Citations (Scopus)

Abstract

Metabolomic technologies are increasingly being applied to study biological questions in a range of different settings from clinical through to environmental. As with other high-throughput technologies, such as those used in transcriptomics and proteomics, metabolomics continues to generate large volumes of complex data that necessitates computational management. Making sense of this wealth of information also requires access to sufficiently detailed and well annotated meta-data. Here we provide standard reporting requirements for describing biological samples, taken from an environmental context and involved in metabolomic experiments. It is our intention that these reporting requirements should guide and support the standardised annotation, dissemination and interpretation of environmental metabolomics meta-data.

Original languageEnglish
Pages (from-to)203-210
Number of pages8
JournalMetabolomics
Volume3
Issue number3
Early online date24 Aug 2007
DOIs
Publication statusPublished - 1 Sep 2007

Keywords

  • Environmental
  • Metabolomics
  • Minimum
  • Reporting Requirements
  • Standard

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    Morrison, N., Bearden, D., Bundy, J. G., Collette, T., Currie, F., Davey, M. P., Haigh, N. S., Hancock, D., Jones, O. A. H., Rochfort, S., Sansone, S. A., Štys, D., Teng, Q., Field, D., & Viant, M. R. M. R. (2007). Standard reporting requirements for biological samples in metabolomics experiments: Environmental context. Metabolomics, 3(3), 203-210. https://doi.org/10.1007/s11306-007-0067-1