Research output per year
Research output per year
- 1 - 50 out of 175 results
Search results
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2024
A comparison between constructed wetland substrates: Impacts on microbial community and wastewater treatment
Cakin, I., Morrissey, B., Marcello, L., Gaffney, P. P. J., Pap, S. & Taggart, M. A., 29 Aug 2024, In: Chemosphere. 364, p. 143179Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Comparing DNA isolation and sequencing strategies for 16S rRNA gene amplicon analysis in biofilm containing environments
Cakin, I., Morrissey, B., Gordon, M., Gaffney, P. P. J., Marcello, L., Macgregor, K. & Taggart, M. A., 20 Mar 2024, In: Journal of Microbiological Methods. 220, 106921.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
Comparing the performance of global, geographically weighted and ecologically weighted species distribution models for Scottish wildcats using GLM and Random Forest predictive modeling
Cushman, S. A., Kilshaw, K., Campbell, R. D., Kaszta, Z., Gaywood, M. & Macdonald, D. W., 8 Apr 2024, In: Ecological Modelling. 492, 110691.Research output: Contribution to journal › Article › peer-review
Open Access8 Citations (Scopus) -
Completing the picture: using vertebrae as well as otoliths in diet analysis reveals new preferred prey of great skuas
Quer, S., Pierce, G. J., Waggershauser, C. N. & Gilbert, L., 30 May 2024, In: Marine Biology. 171, 7, 139.Research output: Contribution to journal › Article › peer-review
Open Access -
Explaining inter-individual differences in habitat relationships among wildcat hybrids in Scotland
Cushman, S. A., Kilshaw, K., Kaszta, Z., Campbell, R. D., Gaywood, M. & Macdonald, D. W., 21 Mar 2024, In: Ecological Modelling. 491, 110656.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
Exploring nonstationary limiting factors in species habitat relationships
Cushman, S. A., Kilshaw, K., Kaszta, Z., Campbell, R. D., Gaywood, M. & Macdonald, D. W., 29 Feb 2024, In: Ecological Modelling. 490, 110663.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
Optimising species detection probability and sampling effort in lake fish eDNA surveys
Sellers, G. S., Jerde, C. L., Harper, L. R., Benucci, M., Muri, C. D., Li, J., Peirson, G., Walsh, K., Hatton-Ellis, T., Duncan, W., Duguid, A., Ottewell, D., Willby, N., Law, A., Bean, C. W., Winfield, I. J., Read, D. S., Handley, L. L. & Hänfling, B., 24 Jul 2024, In: Metabarcoding and Metagenomics. 8, e104655.Research output: Contribution to journal › Article › peer-review
Open Access -
Post-glacial recolonization and multiple scales of secondary contact contribute to contemporary Atlantic salmon (Salmo salar) genomic variation in North America
Nugent, C. M., Kess, T., Langille, B. L., Beck, S. V., Duffy, S., Messmer, A., Smith, N., Lehnert, S. J., Wringe, B. F., Kent, M., Bentzen, P. & Bradbury, I. R., 1 Sept 2024, In: Journal of Biogeography.Research output: Contribution to journal › Article › peer-review
Open Access -
Sociality in unexpected places : Using global remote camera data of a solitary species complex to evaluate the drivers of group formation
Twining, J. P., Sutherland, C., Zalewski, A., Cove, M. V., Birks, J., Wearn, O. R., Haysom, J., Wereszczuk, A., Manzo, E., Bartolommei, P., Mortelliti, A., Evans, B., Gerber, B. D., McGreevy, T. J., Ganoe, L. S., Masseloux, J., Mayer, A. E., Wierzbowska, I., Loch, J. & Akins, J. & 19 others, , 11 Mar 2024, In: Proceedings of the National Academy of Sciences of the United States of America. 121, 12, e2312252121.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
Temporal allele frequency changes in large‐effect loci reveal potential fishing impacts on salmon life‐history diversity
Miettinen, A., Romakkaniemi, A., Dannewitz, J., Pakarinen, T., Palm, S., Persson, L., Östergren, J., Primmer, C. R. & Pritchard, V. L., 1 Apr 2024, In: Evolutionary Applications. 17, 4, 16 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)2 Downloads (Pure) -
The forensic potential of environmental DNA (eDNA) in freshwater wildlife crime investigations: From research to application
Lewis, M., Lainé, K., Dawnay, L., Lamont, D., Scott, K., Mariani, S., Hӓnfling, B. & Dawnay, N., 29 Jun 2024, In: Science & Justice.Research output: Contribution to journal › Article › peer-review
Open Access -
Towards the conservation of the crucian carp in Europe: Prolific hybridization but no evidence for introgression between native and non-native taxa
Jeffries, D. L., Lawson-Handley, L., Lamatsch, D. K., Olsén, K. H., Sayer, C. D. & Hänfling, B., 30 Aug 2024, In: Molecular ecology.Research output: Contribution to journal › Article › peer-review
Open Access -
Tree felling by beaver promotes regeneration in riparian woodlands whilst increasing resource availability for deer
Wilson, K. A., Law, A., Hester, A. J., Gaywood, M. J. & Willby, N. J., 25 Apr 2024, In: Forest Ecology and Management. 562, 121910.Research output: Contribution to journal › Article › peer-review
Open Access -
Variable importance and scale of influence across individual scottish wildcat hybrid habitat models
Cushman, S. A., Kilshaw, K., Kaszta, Z., Campbell, R. D., Gaywood, M. & Macdonald, D. W., 29 Mar 2024, In: Ecological Modelling. 491, 110698.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
2023
Conservation translocations in Britain
Gaywood, M., Bavin, D., Dalrymple, S., Finger, A., Foster, J. & Pouget, D., 30 Aug 2023, In: British Wildlife. 34, 8, p. 572-583 12 p.Research output: Contribution to journal › Article › peer-review
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Genomic and machine learning-based screening of aquaculture-associated introgression into at-risk wild North American Atlantic salmon (Salmo salar) populations
Nugent, C. M., Kess, T., Brachmann, M. K., Langille, B. L., Holborn, M. K., Beck, S. V., Smith, N., Duffy, S. J., Lehnert, S. J., Wringe, B. F., Bentzen, P. & Bradbury, I. R., 28 May 2023, (E-pub ahead of print) In: Molecular Ecology Resources.Research output: Contribution to journal › Article › peer-review
3 Citations (Scopus) -
Integrating environmental DNA monitoring to inform eel (Anguilla anguilla) status in freshwaters at their easternmost range—A case study in Cyprus
Griffiths, N. P., Wright, R. M., Hänfling, B., Bolland, J. D., Drakou, K., Sellers, G. S., Zogaris, S., Tziortzis, I., Dörflinger, G. & Vasquez, M. I., 27 Feb 2023, In: Ecology and Evolution. 13, 2, 15 p., e9800.Research output: Contribution to journal › Article › peer-review
Open Access -
Maximising signal-to-noise ratios in environmental DNA-based monitoring
Wilding, T. A., Stoeck, T., Morrissey, B. J., Carvalho, S. F. & Coulson, M. W., 1 Feb 2023, In: Science of the Total Environment. 858, 13 p., 159735.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Citations (Scopus)82 Downloads (Pure) -
The genome sequence of the barbel, Barbus barbus (Linnaeus, 1758)
Pitman, R., Hänfling, B. & Bista, I., 10 May 2023, In: Wellcome Open Research. 8, 10 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile22 Downloads (Pure) -
The genome sequence of the nine-spined stickleback, Pungitius pungitius (Linnaeus, 1758)
Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 1 Jun 2023, In: Wellcome Open Research. 8, 555.Research output: Contribution to journal › Article › peer-review
Open Access -
2022
Ancient DNA evidence for the ecological globalization of cod fishing in medieval and post-medieval Europe
Martínez-García, L., Ferrari, G., Cuevas, A., Atmore, L. M., López-Arias, B., Culling, M., Llorente-Rodríguez, L., Morales-Muñiz, A., Roselló-Izquierdo, E., Quirós, J. A., Marlasca-Martín, R., Hänfling, B., Hutchinson, W. F., Jakobsen, K. S., Jentoft, S., Orton, D., Star, B. & Barrett, J. H., 19 Oct 2022, In: Proceedings of the Royal Society B: Biological Sciences. 289, 1985, 20221107.Research output: Contribution to journal › Article › peer-review
Open AccessFile45 Downloads (Pure) -
Application of climate-smart forestry – Forest manager response to the relevance of European definition and indicators
Bowditch, E., Santopuoli, G., Neroj, B., Svetlik, J., Tominlson, M., Pohl, V., Avdagić, A., del Rio, M., Zlatanov, T., Maria, H., Jamnická, G., Serengil, Y., Sarginci, M., Brynleifsdóttir, S. J., Lesinki, J. & Azevedo, J. C., 3 Aug 2022, In: Trees, Forests and People. 9, 14 p., 100313.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Citations (Scopus)54 Downloads (Pure) -
A strategy for successful integration of DNA-based methods in aquatic monitoring
Blancher, P., Lefrançois, E., Rimet, F., Vasselon, V., Argillier, C., Arle, J., Beja, P., Boets, P., Boughaba, J., Chauvin, C., Deacon, M., Duncan, W., Ejdung, G., Erba, S., Ferrari, B., Fischer, H., Hänfling, B., Haldin, M., Hering, D. & Hette-Tronquart, N. & 35 others, , 20 Jul 2022, In: Metabarcoding and Metagenomics. 6, p. 215-226 12 p.Research output: Contribution to journal › Article › peer-review
Open Access19 Citations (Scopus) -
Interspecific coprophagia by wild red foxes: DNA metabarcoding reveals a potentially widespread form of commensalism among animals
Waggershauser, C. N., Taberlet, P., Coissac, E., Kortland, K., Hambly, C. & Lambin, X., 1 Jul 2022, In: Ecology and Evolution. 12, 7Research output: Contribution to journal › Article › peer-review
Open Access13 Citations (Scopus) -
The true picture of environmental DNA, a case study in harvested fishponds
Blabolil, P., Griffiths, N. P., Hänfling, B., Jůza, T., Draštík, V., Knežević-Jarić, J., dos Santos, R., Mrkvička, T. & Peterka, J., 30 Jul 2022, In: Ecological Indicators. 142, 12 p., 109241.Research output: Contribution to journal › Article › peer-review
Open Access -
2021
A large wild salmon stock shows genetic and life history differentiation within, but not between, rivers
Miettinen, A., Palm, S., Dannewitz, J., Lind, E., Primmer, C. R., Romakkaniemi, A., Östergren, J. & Pritchard, V. L., 28 Feb 2021, In: Conservation Genetics. 22, 1, p. 35-51 17 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile10 Citations (Scopus)72 Downloads (Pure) -
Environmental DNA metabarcoding uncovers environmental correlates of fish communities in spatially heterogeneous freshwater habitats
Blabolil, P., Harper, L. R., Říčanová, Š., Sellers, G., Di Muri, C., Jůza, T., Vašek, M., Sajdlová, Z., Rychtecký, P., Znachor, P., Hejzlar, J., Peterka, J. & Hänfling, B., 30 Jul 2021, In: Ecological Indicators. 126, 107698.Research output: Contribution to journal › Article › peer-review
Open Access29 Citations (Scopus) -
Eurasian beaver (Castor fiber) health surveillance in Britain: Assessing a disjunctive reintroduced population
Campbell-Palmer, R., Rosell, F., Naylor, A., Cole, G., Mota, S., Brown, D., Fraser, M., Pizzi, R., Elliott, M., Wilson, K., Gaywood, M. & Girling, S., 1 Apr 2021, In: Veterinary Record. 188, 8, e84.Research output: Contribution to journal › Article › peer-review
6 Citations (Scopus) -
Genetic Drift Dominates Genome-Wide Regulatory Evolution Following an Ancient Whole-Genome Duplication in Atlantic Salmon
Verta, J. P., Barton, H. J., Pritchard, V. & Primmer, C. R., 22 Mar 2021, In: Genome Biology and Evolution. 13, 5, evab059.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
Lethal interactions among forest‐grouse predators are numerous, motivated by hunger and carcasses, and their impacts determined by the demographic value of the victims
Waggershauser, C. N., Ruffino, L., Kortland, K. & Lambin, X., 1 Jun 2021, In: Ecology and Evolution. 11, 12, p. 7164-7186 12 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Citations (Scopus) -
Mapping biodiversity hotspots of fish communities in subtropical streams through environmental DNA
Blackman, R. C., Osathanunkul, M., Brantschen, J., Di Muri, C., Harper, L. R., Mächler, E., Hänfling, B. & Altermatt, F., 14 May 2021, In: Scientific Reports. 11, 1, 10375.Research output: Contribution to journal › Article › peer-review
Open Access35 Citations (Scopus) -
Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of north-eastern Europe
Zueva, K. J., Lumme, J., Veselov, A. E., Primmer, C. R. & Pritchard, V. L., 17 Jun 2021, In: Journal of Evolutionary Biology. 34, 6Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
The best defence is not being there: avoidance of larger carnivores is not driven by risk intensity
Zalewska, K., Waggershauser, C. N., Kortland, K. & Lambin, X., 1 Oct 2021, In: Journal of Zoology. 315, 2, p. 110-122Research output: Contribution to journal › Article › peer-review
Open Access10 Citations (Scopus) -
The elm is dead! Long live the elm! New developments for elm conservation in Scotland
Bowditch, E. & Macdonald, E., 1 Aug 2021, In: Scottish Forestry. 75, 2, p. 29-38 11 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile271 Downloads (Pure) -
The response of a brown trout (Salmo trutta) population to reintroduced eurasian beaver (castor fiber) habitat modification
Needham, R. J., Gaywood, M., Tree, A., Sotherton, N., Roberts, D., Bean, C. W. & Kemp, P. S., 11 Nov 2021, In: Canadian Journal of Fisheries and Aquatic Sciences. 78, 11, p. 1650-1660 11 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
2020
Assessing the impact of the threatened crucian carp (Carassius carassius) on pond invertebrate diversity: A comparison of conventional and molecular tools
Harper, L. R., Lawson Handley, L., Sayer, C. D., Read, D. S., Benucci, M., Blackman, R. C., Hill, M. J. & Hänfling, B., 1 Oct 2020, In: Molecular ecology. 30, 13, p. 3252-3269 18 p.Research output: Contribution to journal › Article › peer-review
Open Access13 Citations (Scopus) -
Beaver genetic surveillance in Britain
Campbell-Palmer, R., Senn, H., Girling, S., Pizzi, R., Elliott, M., Gaywood, M. & Rosell, F., 5 Oct 2020, In: Global Ecology and Conservation. 24, e01275.Research output: Contribution to journal › Article › peer-review
Open Access11 Citations (Scopus) -
Beavers: The original engineers of Britain's fresh waters
Wilson, K., Law, A., Gaywood, M., Ramsay, P. & Willby, N., Aug 2020, In: British Wildlife. 31, 6, p. 403-411 9 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
Environmental DNA metabarcoding provides enhanced detection of the European eel Anguilla anguilla and fish community structure in pumped river catchments
Griffiths, N. P., Bolland, J. D., Wright, R. M., Murphy, L. A., Donnelly, R. K., Watson, H. V. & Hänfling, B., 15 Aug 2020, In: Journal of Fish Biology. 97, 5, p. 1375-1384 10 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile12 Citations (Scopus)31 Downloads (Pure) -
Fishing for mammals: Landscape-level monitoring of terrestrial and semi-aquatic communities using eDNA from riverine systems
Sales, N. G., McKenzie, M. B., Drake, J., Harper, L. R., Browett, S. S., Coscia, I., Wangensteen, O. S., Baillie, C., Bryce, E., Dawson, D. A., Ochu, E., Hänfling, B., Lawson Handley, L., Mariani, S., Lambin, X., Sutherland, C. & McDevitt, A. D., 10 Mar 2020, In: Journal of Applied Ecology. 57, 4, p. 707-716 10 p.Research output: Contribution to journal › Article › peer-review
80 Citations (Scopus) -
More than one million barriers fragment Europe’s rivers
Verspoor, E. & Marcello, L., 16 Dec 2020, In: Nature. 588, p. 436-441 5 p.Research output: Contribution to journal › Article › peer-review
Open Access393 Citations (Scopus) -
Read counts from environmental DNA (eDNA) metabarcoding reflect fish abundance and biomass in drained ponds
Di Muri, C., Handley, L. L., Bean, C. W., Li, J., Peirson, G., Sellers, G. S., Walsh, K., Watson, H. V., Winfield, I. J. & Hänfling, B., 22 Oct 2020, In: Metabarcoding and Metagenomics. 4, p. 97-112 16 p.Research output: Contribution to journal › Article › peer-review
Open Access67 Citations (Scopus) -
Simple, sensitive and species-specific assays for detecting quagga and zebra mussels (Dreissena rostriformis bugensis and d. polymorpha) using environmental DNA
Blackman, R. C., Benucci, M., Donnelly, R. C., Hänfling, B., Harper, L. R., Sellers, G. S. & Handley, L. L., 30 Jun 2020, In: Management of Biological Invasions. 11, 2, p. 218-236 19 p.Research output: Contribution to journal › Article › peer-review
Open Access10 Citations (Scopus) -
Targeted and passive environmental DNA approaches outperform established methods for detection of quagga mussels, Dreissena rostriformis bugensis in flowing water
Blackman, R. C., Ling, K. K. S., Harper, L. R., Shum, P., Hänfling, B. & Lawson-Handley, L., 29 Oct 2020, In: Ecology and Evolution. 10, 23, p. 13248-13259 12 p.Research output: Contribution to journal › Article › peer-review
Open Access27 Citations (Scopus) -
Using DNA metabarcoding to investigate diet and niche partitioning in the native European otter (Lutra lutra) and invasive American mink (Neovison vison)
Harper, L. R., Watson, H. V., Donnelly, R., Hampshire, R., Sayer, C. D., Breithaupt, T. & Hänfling, B., 26 Nov 2020, In: Metabarcoding and Metagenomics. 4, p. 113-133 21 p.Research output: Contribution to journal › Article › peer-review
Open Access15 Citations (Scopus) -
Using field sign surveys to estimate spatial distribution and territory dynamics following reintroduction of the Eurasian beaver to British river catchments
Campbell-Palmer, R., Puttock, A., Wilson, K. A., Leow-Dyke, A., Graham, H. A., Gaywood, M. J. & Brazier, R. E., 9 Dec 2020, In: River Research and Applications. 37, 3, p. 343-357 15 p.Research output: Contribution to journal › Article › peer-review
Open Access15 Citations (Scopus) -
What is Climate-Smart Forestry? A definition from a multinational collaborative process focused on mountain regions of Europe
Bowditch, E., Santopouli, G., Binder, F., Del Rio, M., La Porta, N., Kluvankova, T., Linsinki, J., Motta, R., Pach, M., Panzacchi, P., Pretzsch, H., Temperli, C., Tonon, G., Smith, M., Velikova, V., Weatherall, A. & Tognetti, R., 7 May 2020, (E-pub ahead of print) In: Ecosystem Services. 43, p. 1-13 13 p., 101113.Research output: Contribution to journal › Article › peer-review
Open AccessFile111 Citations (Scopus)133 Downloads (Pure) -
2019
Environmental DNA (eDNA) metabarcoding of pond water as a tool to survey conservation and management priority mammals
Harper, L. R., Lawson Handley, L., Carpenter, A. I., Ghazali, M., Di Muri, C., Macgregor, C. J., Logan, T. W., Law, A., Breithaupt, T., Read, D. S., McDevitt, A. D. & Hänfling, B., 30 Oct 2019, In: Biological Conservation. 238, 108225.Research output: Contribution to journal › Article › peer-review
88 Citations (Scopus) -
Fish conservation in the land of steppe and sky: Evolutionarily significant units of threatened salmonid species in Mongolia mirror major river basins
Kaus, A., Michalski, S., Hänfling, B., Karthe, D., Borchardt, D. & Durka, W., 27 Feb 2019, In: Ecology and Evolution. 9, 6, p. 3416-3433 18 p.Research output: Contribution to journal › Article › peer-review
Open Access17 Citations (Scopus) -
Gene expression in the phenotypically plastic Arctic charr (Salvelinus alpinus): A focus on growth and ossification at early stages of development
Beck, S. V., Räsänen, K., Ahi, E. P., Kristjánsson, B. K., Skúlason, S., Jónsson, Z. O. & Leblanc, C. A., 10 Jan 2019, In: Evolution & Development. 21, 1, p. 16-30 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile14 Citations (Scopus)50 Downloads (Pure)