Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays

Agata Drywa; Anita Poćwierz-kotus; Stefan Dobosz; Matthew P. Kent; Sigbjørn Lien; Roman Wenne

doi:10.1016/j.margen.2014.03.003

Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays

Agata Drywa
, Anita Poćwierz-kotus
, Stefan Dobosz
, Matthew P. Kent
, Sigbjørn Lien
, Roman Wenne

Institute for Biodiversity and Freshwater Conservation

Publikation: Article › Begutachtung

12 Zitate (Scopus)

Abstract

This paper reports the use of SNP-array technology in a cross-species study for non-ambiguous species identifications. Based on an existing SNP-array for Atlantic salmon (cross)hybridisations with samples of salmon, brown trout and rainbow trout were analyzed to identify species-specific diagnostic markers. In total 566 SNP loci were identified to be highly polymorphic across the three salmonid species providing the molecular basement for various monitoring applications in aquaculture and food industries.

Originalsprache	English
Seiten (von - bis)	5-6
Seitenumfang	2
Fachzeitschrift	Marine Genomics
Jahrgang	15
Frühes Online-Datum	2 Apr. 2014
DOIs	https://doi.org/10.1016/j.margen.2014.03.003
Publikationsstatus	Published - 1 Juni 2014

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10.1016/j.margen.2014.03.003Lizenz: CC BY-NC-ND

http://linkinghub.elsevier.com/retrieve/pii/S1874778714000294Lizenz: CC BY-NC-ND

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title = "Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays",

abstract = "This paper reports the use of SNP-array technology in a cross-species study for non-ambiguous species identifications. Based on an existing SNP-array for Atlantic salmon (cross)hybridisations with samples of salmon, brown trout and rainbow trout were analyzed to identify species-specific diagnostic markers. In total 566 SNP loci were identified to be highly polymorphic across the three salmonid species providing the molecular basement for various monitoring applications in aquaculture and food industries.",

keywords = "SNP array, Genotyping, Salmonids, Salmo, Oncorhynchus",

author = "Agata Drywa and Anita Po{\'c}wierz-kotus and Stefan Dobosz and Kent, \{Matthew P.\} and Sigbj{\o}rn Lien and Roman Wenne",

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AU - Drywa, Agata

AU - Poćwierz-kotus, Anita

AU - Dobosz, Stefan

AU - Kent, Matthew P.

AU - Lien, Sigbjørn

AU - Wenne, Roman

PY - 2014/6/1

Y1 - 2014/6/1

N2 - This paper reports the use of SNP-array technology in a cross-species study for non-ambiguous species identifications. Based on an existing SNP-array for Atlantic salmon (cross)hybridisations with samples of salmon, brown trout and rainbow trout were analyzed to identify species-specific diagnostic markers. In total 566 SNP loci were identified to be highly polymorphic across the three salmonid species providing the molecular basement for various monitoring applications in aquaculture and food industries.

AB - This paper reports the use of SNP-array technology in a cross-species study for non-ambiguous species identifications. Based on an existing SNP-array for Atlantic salmon (cross)hybridisations with samples of salmon, brown trout and rainbow trout were analyzed to identify species-specific diagnostic markers. In total 566 SNP loci were identified to be highly polymorphic across the three salmonid species providing the molecular basement for various monitoring applications in aquaculture and food industries.

KW - SNP array

KW - Genotyping

KW - Salmonids

KW - Salmo

KW - Oncorhynchus

U2 - 10.1016/j.margen.2014.03.003

DO - 10.1016/j.margen.2014.03.003

M3 - Article

SN - 1874-7787

VL - 15

SP - 5

EP - 6

JO - Marine Genomics

JF - Marine Genomics

ER -

Identification of multiple diagnostic SNP loci for differentiation of three salmonid species using SNP-arrays

Abstract

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